Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015807757.1_cds_XP_016494984.1_9345
CDS Infomation

[gene=LOC107814151] [db_xref=GeneID:107814151] [protein=beta-amylase 3, chloroplastic-like] [protein_id=XP_016494984.1] [location=complement(join(34773..35567,35702..35812,36614..36824,37368..37891))] [gbkey=CDS]
Sequence

ATGGCTTTAACACCTCATTCTTCAACTTCTTTTATCAATATAACAGAAACCAAAGGTATT
AAAACACCTGATGATTTCTTAGGCATGGTTTCGTTTGCACTAACGAAGCCATCTTGTCGT
CTCATGATAACAAAGAGTTCCATGCAAGAAGCTCAACTCTCTCATGAGAGAGTTATCGGT
AATGAGGAAAGGGAAAAACTTCATGTCCTAACAACTACTCACAGTAATATTAATAGTAGT
ACAAAGGTACCTGTTTTTGTGATGTTGCCACTTGACACCATAACCATGGGAGGGAACTTG
AACAAACCACGAGCGATGCACGTGAGTTTAATGGCGTTGAAAAGTGCTGGAGTTGAAGGA
GTAATGGTAGATGCTTGGTGGGGTTTGGTTGAAAAAGATGGACCTTTGAAATATAACTGG
GAAGGTTATGCTGAACTTGTTAAGATGTGCAAAGAACATGGCTTGAAACTTCAAGTTGTC
ATGTCTTTTCATCAGTGCGGTGGAAATGTTGGAGACTCTTGCAGTATTCCTCTACCTCCA
TGGGTACTTGAAGATATCGGGAAGAATCCAGATCTTGTCTACACAGATAGATCAGGAAGG
AGAAATCCCGAGTATATTTCCTTAGGTTGTGATATGTTACCAGTACTCAAAGGAAGAACA
CCCATTCAGGTATACACTGACTATATGAGGAGCTTCAGAGAAAGATTCAGCCATTACTTG
GGAGATGTCATAGTGGAGATTCAAGTGGGATTGGGTCCGTGTGGGGAGCTAAGATATCCA
TCCTACCCAGAAAGCAATGGTACTTGGAGATTTCCTGGAATTGGAGAATTCCAGAACTAT
GACAAGTACATGAGAGCTTCATTGGCAGCATCTGCCAATGCGGCGGGAAAGGATGACTGG
GGCCAGGGAGGGCCTCATGACTCAGGACAGTACAACCAATTTCCTGAAGATACTGGATTT
TTCCAAAGAGATGGAACATGGAATAGTGAATATGGAAAGTTCTTCCTAGAGTGGTATTCA
GGAAAGCTACTGGAGCATGGCGACAGGATCCTAGGAGCAGCAGAAAGTATATACCAAGGA
ACTGGGGCTAAACTATCTGGAAAGGTAGCTGGAATTCATTGGCATTACAATACCAGATCA
CATGCTGCAGCAGAGTTAACAGCAGGATACTACAATACGAGAGACACAAATGGCTATCTA
CCTATATCACGTATGTTCGGGAAACATCATGTTGTATTTAACTTTACATGTATGGAAATG
AGGGATGGTGAACAGCCCCAGAGTGCAAATTGCTCACCAGAAGGCTTAGTTCGACAAGTA
AAAAAAGCAACTAGAACTTCTGAAGTAGAACTTGCTGGAGAGAATGCTCTAGAGAGGTAC
GATGAAGGAGCATATTCTCAGGTTTTGGCAACAAGCAGGTCAGATTCTGGAAATGCATTG
AGCGCATTTACATTCCTGAGAATGAACAAACGGTTGTTTGAGCCAGAAAATTGGCAGAAT
TTAGGGCAATTCGTGAAAAGCATGTCAGGAGGAGGCCGAAATGCTAGACGTCCAGAGTGT
GACTCAAGCAGGACAGACCTCTATGTAGGATTTATCAAAAAGACTCATTCTATGAAAGTT
AAAGAGATAGCACTAGTGTAA

Peptide Sequence

PEP ID

XP_016494984.1
PEP Infomation

PREDICTED: beta-amylase 3, chloroplastic-like [Nicotiana tabacum]
Sequence

MALTPHSSTSFINITETKGIKTPDDFLGMVSFALTKPSCRLMITKSSMQEAQLSHERVIG
NEEREKLHVLTTTHSNINSSTKVPVFVMLPLDTITMGGNLNKPRAMHVSLMALKSAGVEG
VMVDAWWGLVEKDGPLKYNWEGYAELVKMCKEHGLKLQVVMSFHQCGGNVGDSCSIPLPP
WVLEDIGKNPDLVYTDRSGRRNPEYISLGCDMLPVLKGRTPIQVYTDYMRSFRERFSHYL
GDVIVEIQVGLGPCGELRYPSYPESNGTWRFPGIGEFQNYDKYMRASLAASANAAGKDDW
GQGGPHDSGQYNQFPEDTGFFQRDGTWNSEYGKFFLEWYSGKLLEHGDRILGAAESIYQG
TGAKLSGKVAGIHWHYNTRSHAAAELTAGYYNTRDTNGYLPISRMFGKHHVVFNFTCMEM
RDGEQPQSANCSPEGLVRQVKKATRTSEVELAGENALERYDEGAYSQVLATSRSDSGNAL
SAFTFLRMNKRLFEPENWQNLGQFVKSMSGGGRNARRPECDSSRTDLYVGFIKKTHSMKV
KEIALV

Transcript Sequence

Gene sequence data has not been registered.